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Decitabine DNA Methyltransferase inhibidor

Name: Decitabine
Brand: Selleck Chemicals
SKU: S1200
Rating: 5 (220 reviews)

Cat. No.S1200

Decitabine es un inhibidor de la DNA methyltransferase, que se incorpora al ADN y resulta en la hipometilación del ADN y la detención de la replicación del ADN en fase intra-S. Se utiliza para tratar el síndrome mielodisplásico (SMD). Decitabine induce la detención del ciclo celular y la apoptosis en varias líneas celulares de cáncer.

Decitabine DNA Methyltransferase inhibidor Chemical Structure

Estructura química

Peso molecular: 228.21

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Control de calidad

Lote: Pureza: 99.90%

99.90

Dianas relacionadas	HDAC JAK BET Histone Methyltransferase PKC PARP HIF PRMT EZH2 AMPK
Otros DNA Methyltransferase Inhibidores	RG108 SGI-1027 Zebularine (NSC 309132) GSK3685032 Gamma-Oryzanol CM272 β-thujaplicin Bobcat339 DC-05 2'-Deoxy-5-Fluorocytidine

Cultivo celular, tratamiento y concentración de trabajo

Líneas celulares	Tipo de ensayo	Concentración	Tiempo de incubación	Formulación	Descripción de la actividad	PMID
Eca109	Function Assay	0.5 μM	24 h	water	modulates the gene expression of MAGE-A members	25123082
Eca109	Growth Inhibition Assay	0.5/2.5/5 μM	24/48/72 h	water	inhibits cell growth in both dose- and time- dependent manner	25123082
Eca109	Function Assay	0.5 μM	6/12/24 h	water	inhibits cell migration	25123082
Eca109	Function Assay	0.5 μM	24 h	water	inhibits cell invasion	25123082
Eca109	Growth Inhibition Assay	0.5 μM	24 h	water	induces G2/M arrest in the cell cycle	25123082
Eca109	Function Assay	0.5/1 μM	24 h	water	decreases expression of NF-κB2 and MMP2	25123082
SW1116	Growth Inhibition Assay	0.5/1/2/5 μM	48 h	DMSO	enhances the Gefitinib induced cell inhibition	24874286
LOVO	Growth Inhibition Assay	0.5/1/2/5 μM	48 h	DMSO	enhances the Gefitinib induced cell inhibition	24874286
SW1116	Function Assay	10 μM	48 h	DMSO	increases the effective at inhibiting AKT and mTOR signaling pathways combined with gefitinib	24874286
LOVO	Function Assay	10 μM	48 h	DMSO	increases the effective at inhibiting AKT and mTOR signaling pathways combined with gefitinib	24874286
SW1116	Apoptosis Assay	10 μM	48 h	DMSO	enhances Gefitinib-induced apoptosis	24874286
LOVO	Apoptosis Assay	10 μM	48 h	DMSO	enhances Gefitinib-induced apoptosis	24874286
RPMI-8226	Apoptosis Assay	1/2 μM	48/72/96 h	DMSO	induces cell apoptosis	24833108
OPM-2	Apoptosis Assay	1/2 μM	72/96/120 h	DMSO	induces cell apoptosis	24833108
JJN3	Apoptosis Assay	0.5/1 μM	24/48 h	DMSO	induces cell apoptosis	24833108
NCI-H929	Apoptosis Assay	1/2 μM	72/96/120 h	DMSO	induces cell apoptosis	24833108
RPMI-8226	Growth Inhibition Assay	1/2 μM	24/48/72 h	DMSO	affects cell cycle progression negatively	24833108
OPM-2	Growth Inhibition Assay	1/2 μM	24/48/72 h	DMSO	affects cell cycle progression negatively	24833108
JJN3	Growth Inhibition Assay	0.5/1 μM	24/48/72 h	DMSO	affects cell cycle progression negatively	24833108
NCI-H929	Growth Inhibition Assay	1/2 μM	24/48/72 h	DMSO	affects cell cycle progression negatively	24833108
HeLa	Kinase Assay				Ki=1000–5000 μM for hENT1	24780098
HeLa	Kinase Assay				Ki=5.6 ± 0.5 μM for hENT2	24780098
HeLa	Kinase Assay				Ki=21.6 ± 3.0 μM for hCNT1	24780098
HeLa	Kinase Assay				Ki=14.4 ± 4.6 μM for hCNT3	24780098
NB4	Function Assay	2.5/5/7.5/10 μM	24 h	DMSO	increasea the expression of precursor miR-125a	24484870
CD4+ CD25− T	Function Assay	1/5 μM			reduceS global DNA methylation	24476360
BV-173	Apoptosis Assay	0.25/0.5/0.75/1 μM	48/72/96 h	PBS	induces cell apoptosis in both dose- and time- dependent manner	24423613
ML-1	Apoptosis Assay	0.25/0.5/0.75/1 μM	48/72/96 h	PBS	induces cell apoptosis in both dose- and time- dependent manner	24423613
HL-60	Apoptosis Assay	0.25/0.5/0.75/1 μM	48/72/96 h	PBS	induces cell apoptosis in both dose- and time- dependent manner	24423613
KG-1a	Apoptosis Assay	0.25/0.5/0.75/1 μM	48/72/96 h	PBS	induces cell apoptosis in both dose- and time- dependent manner	24423613
BV-173	Function Assay	250/500nM	48 h	PBS	induces delayed and sustained ROS increase	24423613
CEM	Function Assay	250/500nM	48 h	PBS	induces delayed and sustained ROS increase	24423613
HL-60	Function Assay	250/500nM	48 h	PBS	induces delayed and sustained ROS increase	24423613
ML-1	Function Assay	250/500nM	48 h	PBS	induces delayed and sustained ROS increase	24423613
DLD-1	Function Assay	250/500nM	48 h	PBS	do not induces delayed and sustained ROS increase	24423613
HCT-116	Function Assay	250/500nM	48 h	PBS	do not induces delayed and sustained ROS increase	24423613
U937-A/E-9/14/18	Apoptosis Assay	0.01/0.1/1/10 μM	48 h		induces cell apoptosis in a dose-dependent manner	24300456
HT29	Growth Inhibition Assay		72 h		IC50=1400±179 μM	24172061
SW48	Growth Inhibition Assay		72 h		IC50=15.2±6.2 μM	24172061
HCT116	Growth Inhibition Assay		72 h		IC50=1.7±0.4 μM	24172061
HepG2	Function Assay	0.5/1 μM	24 h	DMSO	up-regulated the relative OCTN2 mRNA and protein expression	24146874
LS174T	Function Assay	0.5/1 μM	24 h	DMSO	lead to an increase of OCTN2 levels	24146874
HepG2	Apoptosis Assay	1/10/100 μM	7 d	DMSO	induces cell apoptosis in a dose-dependent manner	24146874
LS174T	Apoptosis Assay	1/10/100 μM	7 d	DMSO	induces cell apoptosis in a dose-dependent manner	24146874
QBC-939	Apoptosis Assay	1/10/100 μM	7 d	DMSO	induces cell apoptosis in a dose-dependent manner	24146874
U251	Apoptosis Assay	1/10/100 μM	7 d	DMSO	induces cell apoptosis in a dose-dependent manner	24146874
HL-60	Growth Inhibition Assay	1 μM	48 h		increases G2-phase cell fraction	24000324
MDA‑MB‑453	Function Assay	0.2/1 μM	72 h		causes re-expression of claudin 1	23844228
HCC1569	Function Assay	0.2/1 μM	72 h		causes re-expression of claudin 1	23844228
BT‑474	Function Assay	0.2/1 μM	72 h		causes re-expression of claudin 1	23844228
AGS	Apoptosis Assay	5/10/20/50 μM	48 h	DMSO	inhibits the cell viability	23582784
A549	Apoptosis Assay	5/10/20/50 μM	48 h	DMSO	inhibits the cell viability	23582784
AGS	Growth Inhibition Assay	5/10/20/50 μM	48 h	DMSO	induces G2/M phase arrest	23582784
Kasumi-1	Apoptosis Assay	0.5 μM	48 h		decreases the cell viability co-treated with Tf-NP-sc	23493348
OCI-AML3	Apoptosis Assay	2.5 μM	48 h		decreases the cell viability co-treated with Tf-NP-sc	23493348
MV4-11	Apoptosis Assay	2.5 μM	48 h		decreases the cell viability co-treated with Tf-NP-sc	23493348
NK	Cytotoxity Assay	0.02-20 μM	5 d		decreases the cytolytic activity of NK cells at intermediate concentrations resulting in a U-shaped dose–response curve	23328088
NK	Apoptosis Assay	0.02-20 μM	5 d		decrease NK cell proliferation and viability as the concentration increased	23328088
NK	Function Assay	0.01-20 μM	5 d		causes hypomethylation of NK cells in a dose–response	23328088
MOLT4/DNR	Function Assay	5 μM	4 d		reduces ABCB1 mRNA expression	23060570
Jurkat/DOX	Function Assay	5 μM	4 d		reduces ABCB1 mRNA expression	23060570
MOLT4/DNR	Growth Inhibition Assay	5 μM	4 d		reduces the IC50 value for daunorubicin sensitivity	23060570
Jurkat/DOX	Growth Inhibition Assay	5 μM	4 d		reduces the IC50 value for daunorubicin sensitivity	23060570
ccRCC	Apoptosis Assay	0.01-10μM	72 h	DMSO	has minimal effect on cell proliferation	22826467
TNBC	Apoptosis Assay	0.01-10μM	72 h	DMSO	has minimal effect on cell proliferation	22826467
A498	Apoptosis Assay	0.01-10μM	72 h	DMSO	induces synergistic responses with romidepsin	22826467
KIJ265T	Apoptosis Assay	0.01-10μM	72 h	DMSO	induces synergistic responses with romidepsin	22826467
MDA-231	Apoptosis Assay	0.01-10μM	72 h	DMSO	induces synergistic responses with romidepsin	22826467
BT-20	Apoptosis Assay	0.01-10μM	72 h	DMSO	induces synergistic responses with romidepsin	22826467
U937	Growth Inhibition Assay	5-20 μM	24/48/72 h		induces a decrease in cell viability in a concentration- and time-dependent manner	22767021
HL60	Growth Inhibition Assay	5-20 μM	24/48/72 h		induces a decrease in cell viability in a concentration- and time-dependent manner	22767021
U937	Apoptosis Assay	15 μM	24/48/72 h		induces cell apoptosis	22767021
HL60	Apoptosis Assay	15 μM	24/48/72 h		induces cell apoptosis	22767021
LS411N	Apoptosis Assay	0.5 μM	72 h		increases Fas mRNA level	22461695
MDA-MB-231	Apoptosis Assay	10 μM	48 h		reduces cell viability in a dose-dependent manner	21887697
MCF-7	Apoptosis Assay	10 μM	48 h		reduces cell viability in a dose-dependent manner	21887697
A375	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
SKMEL1	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
SKMEL3	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
SKMEL28	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
MeWo	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
B16	Growth Inhibition Assay	0.5 μM	1/5/8 d		inhibits proliferation and induces differentiation of melanoma cells	21796622
Ly 1	Growth Inhibition Assay		24 h		IC50=7.3 μM	21772049
Ly 7	Growth Inhibition Assay		24 h		IC50=10.7 μM	21772049
Su-DHL6	Growth Inhibition Assay		24 h		IC50＞20 μM	21772049
Ly 10	Growth Inhibition Assay		24 h		IC50＞20 μM	21772049
RIVA	Growth Inhibition Assay		24 h		IC50＞20 μM	21772049
Su-DHL2	Growth Inhibition Assay		24 h		IC50＞20 μM	21772049
Ly 1	Growth Inhibition Assay		48 h		IC50=0.34 μM	21772049
Ly 7	Growth Inhibition Assay		48 h		IC50=0.025 μM	21772049
Su-DHL6	Growth Inhibition Assay		48 h		IC50＞20 μM	21772049
Ly 10	Growth Inhibition Assay		48 h		IC50=1.8 μM	21772049
RIVA	Growth Inhibition Assay		48 h		IC50＞20 μM	21772049
Su-DHL2	Growth Inhibition Assay		48 h		IC50=17.4 μM	21772049
Ly 1	Growth Inhibition Assay		72 h		IC50=0.01 μM	21772049
Ly 7	Growth Inhibition Assay		72 h		IC50=0.018 μM	21772049
Su-DHL6	Growth Inhibition Assay		72 h		IC50=1.6 μM	21772049
Ly 10	Growth Inhibition Assay		72 h		IC50=1.2 μM	21772049
RIVA	Growth Inhibition Assay		72 h		IC50＞20 μM	21772049
Su-DHL2	Growth Inhibition Assay		72 h		IC50=11.2 μM	21772049
U373-MAGI	Antiviral assay	0.25 to 8 uM	2 to 72 hrs		Antiviral activity against VSV-G pseudotyped HIV-1 NL4-3 infected in human U373-MAGI cells assessed as reduction in U5-gag level at 0.25 to 8 uM after 2 to 72 hrs by qPCR method	27117260
U373-MAGI	Antiviral assay	0.25 to 8 uM	2 to 72 hrs		Antiviral activity against VSV-G pseudotyped HIV-1 NL4-3 infected in human U373-MAGI cells assessed as reduction in gag level at 0.25 to 8 uM after 2 to 72 hrs by qPCR method	27117260
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Información química, almacenamiento y estabilidad

Peso molecular	228.21	Fórmula	C₈H₁₂N₄O₄	Almacenamiento (Desde la fecha de recepción)	3 años-20°Cpolvo
Nº CAS	2353-33-5	Descargar SDF		Almacenamiento de soluciones madre	1 año-80°Cen disolvente 1 mes-20°Cen disolvente
Sinónimos	Deoxycytidine, 5-aza-2'-deoxycytidine, 5-AZA-dC, 5-aza-CdR,NSC 127716			Smiles	C1C(C(OC1N2C=NC(=NC2=O)N)CO)O

Solubilidad

In vitro
Lote:

DMSO : 45 mg/mL (197.18 mM)
(El DMSO contaminado con humedad puede reducir la solubilidad. Usar DMSO fresco y anhidro.)

Water : 22.5 mg/mL

Ethanol : Insoluble

Calculadora de Molaridad

Masa	Concentración	Volumen	Peso molecular
=	×	×

Calculadora de Dilución Calculadora de Peso Molecular

In vivo Lote:
Homogeneous suspension	CMC-NA	≥5mg/ml	Taking the 1 mL working solution as an example, add 5 mg of this product to 1 ml of CMC-Na solution, mix evenly to obtain a homogeneous suspension with a final concentration of 5 mg/ml.
Homogeneous suspension	CMC-NA	≥5mg/ml	Taking the 1 mL working solution as an example, add 5 mg of this product to 1 ml of CMC-Na solution, mix evenly to obtain a homogeneous suspension with a final concentration of 5 mg/ml.
Homogeneous suspension	CMC-NA	≥5mg/ml	Taking the 1 mL working solution as an example, add 5 mg of this product to 1 ml of CMC-Na solution, mix evenly to obtain a homogeneous suspension with a final concentration of 5 mg/ml.
Homogeneous suspension	CMC-NA	≥5mg/ml	Taking the 1 mL working solution as an example, add 5 mg of this product to 1 ml of CMC-Na solution, mix evenly to obtain a homogeneous suspension with a final concentration of 5 mg/ml.
Homogeneous suspension	CMC-NA	≥5mg/ml	Taking the 1 mL working solution as an example, add 5 mg of this product to 1 ml of CMC-Na solution, mix evenly to obtain a homogeneous suspension with a final concentration of 5 mg/ml.
Clear solution	water Validado por los laboratorios Selleck. Si necesita ajustes en esta formulación, contacte con nuestro equipo de ventas para pruebas personalizadas.	10.000mg/ml (43.82mM)	Taking the 1 mL working solution as an example, add 10 mg of this product to 1 ml of ddH2O, mix evenly to make it clear, The mixed solution should be used immediately for optimal results.

Calculadora de formulación in vivo (Solución clara)

Paso 1: Introduzca la información a continuación (Recomendado: Un animal adicional para tener en cuenta la pérdida durante el experimento)

Dosis: mg/kg Peso promedio de los animales: g Volumen de dosificación por animal:μL Número de animales:

Paso 2: Introduzca la formulación in vivo (Esto es solo la calculadora, no la formulación. Por favor, contáctenos primero si no hay una formulación in vivo en la sección de Solubilidad.)

% DMSO + % + % Tween 80 + % ddH₂O

%DMSO+ %

Resultados del cálculo:

Concentración de trabajo: mg/ml;

Método para preparar el líquido maestro de DMSO: mg fármaco predissuelto en μL DMSO ( Concentración del líquido maestro mg/mL, Por favor, contáctenos primero si la concentración excede la solubilidad del DMSO del lote del fármaco. )

Método para preparar la formulación in vivo: Tomar μL DMSO líquido maestro, luego añadirμL PEG300, mezclar y clarificar, luego añadirμL Tween 80, mezclar y clarificar, luego añadir μL ddH₂O, mezclar y clarificar.

Método para preparar la formulación in vivo: Tomar μL DMSO líquido maestro, luego añadir μL Aceite de maíz, mezclar y clarificar.

Nota: 1. Por favor, asegúrese de que el líquido esté claro antes de añadir el siguiente disolvente.
2. Asegúrese de añadir el (los) disolvente(s) en orden. Debe asegurarse de que la solución obtenida, en la adición anterior, sea una solución clara antes de proceder a añadir el siguiente disolvente. Se pueden utilizar métodos físicos como el vórtice, el ultrasonido o el baño de agua caliente para ayudar a la disolución.

Mecanismo de acción

Targets/IC₅₀/Ki	DNA methylation (HL-60, KG1a cells)
In vitro	Decitabine inhibe el crecimiento celular de manera dependiente de la dosis y el tiempo con IC50 de aproximadamente 438 nM y 43,8 nM para exposiciones de 72 horas y 96 horas en células leucémicas HL-60 y KG1a, respectivamente. Un estudio reciente muestra que este compuesto exhibe una alta actividad antiproliferativa y proapoptótica contra el linfoma anaplásico de células grandes (ALCL), e inhibe la captación de [³H]–timidina en células KARPAS-299 con una EC50 de 0,49 μM.
Ensayo de quinasa	ensayo de síntesis de ADN
Ensayo de quinasa	La tasa de síntesis de ADN se mide por la incorporación de timidina radiactiva en el ADN. Las células HL-60 y KG1a se suspenden en 2 mL de medio RPMI que contiene 10% de suero fetal en placas de 6 pocillos (35 mm de diámetro) y se incuban con diferentes concentraciones de los fármacos correspondientes durante 48 horas (los fármacos se añaden simultáneamente). A las 48 horas, se añaden 0,5 μCi de [³H] timidina (6,7 Ci/mmol) a cada pocillo y se incuban durante 24 horas adicionales. Las células se colocan en filtros de fibra de vidrio GF/C (2,4 cm de diámetro), se lavan con NaCl frío al 0,9%, ácido tricloroacético frío al 5% y etanol. Los filtros que contienen el ADN se secan, se colocan en líquido de centelleo EcoLite (ICN) y la radioactividad se mide utilizando un contador de centelleo Beckman LS 6000IC. La IC50 se define como la concentración de fármaco que inhibe el 50% de la síntesis de ADN de las líneas celulares leucémicas a partir de la curva dosis-respuesta.
In vivo	En un modelo de xenoinjerto murino ALK+ KARPAS-299, Decitabine a una dosis de 2,5 mg/kg causa un aumento de la apoptosis y una reducción de la proliferación de células tumorales, y también resulta en la desmetilación del supresor tumoral p16INK4A.
Referencias	[1] https://pubmed.ncbi.nlm.nih.gov/12620295/ [2] https://pubmed.ncbi.nlm.nih.gov/22687603/

Aplicaciones

Métodos	Biomarcadores	PMID
Western blot	Survivin / Bcl-2 / p53 / c-Myc / DNMT1 p-AKT / AKT / p-GSK3β / GSK3β / p-Myc / Myc / p-P70 / P70 / p-4EBP-1 / 4EBP-1 / PTEN phospho-p38 / p38 / phospho-NFκB / NFκB p-JAK1 / JAK1 / p-JAK2 / JAK2 / p-STAT3 / STAT3 E-cadherin / N-cadherin / Snail / MMP-2 / MMP-9 / Bcl-2 / Bax	26384351
Immunofluorescence	DNMT1 E-cadherin / MMP-9	21303982
Growth inhibition assay	Cell viability	26384351

Información del ensayo clínico

(datos de https://clinicaltrials.gov, actualizado el 2024-05-22)

Número NCT	Reclutamiento	Condiciones	Patrocinador/Colaboradores	Fecha de inicio	Fases
NCT06291285	Not yet recruiting	Healthy Volunteers	Novo Nordisk A/S	February 27 2024	Phase 1
NCT05960773	Recruiting	Mesothelioma\|Malignant Mesothelioma (MM)\|Early-stage Mesothelioma\|Subclinical Mesothelioma\|BRCA1-Associated Protein-1 (BAP1) Mutations\|Early-stage BAP1-associated Malignancies	National Cancer Institute (NCI)\|National Institutes of Health Clinical Center (CC)	January 31 2024	Phase 2
NCT05835011	Terminated	Myelodysplastic Syndromes	Astex Pharmaceuticals Inc.	July 14 2023	Phase 2
NCT05816356	Recruiting	Healthy	EpiDestiny Inc.\|Worldwide Clinical Trials	March 24 2023	Phase 1

Soporte técnico

Instrucciones de manipulación

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Preguntas frecuentes

Pregunta 1:
Is it a racemic mixture or a monomer?

Respuesta:
Its S1200 is R form.

C1=C0/X	C1:	LOG(C1):
C2=C1/X	C2:	LOG(C2):
C3=C2/X	C3:	LOG(C3):
C4=C3/X	C4:	LOG(C4):
C5=C4/X	C5:	LOG(C5):
C6=C5/X	C6:	LOG(C6):
C7=C6/X	C7:	LOG(C7):
C8=C7/X	C8:	LOG(C8):